| ROUND | Q1 | Q2 | ||
| l1 | l2 | l1 | l2 | |
| Season archive |
| Tuesday, 8 July 2025 | ||||||
| q1l1 |  Olimpija | 1-1 | Kairat | |||
| q1l1 |  The New Saints | 0-0 | Shkëndija | |||
| q1l1 |  KuPS | 1-0 | Milsami | |||
| q1l1 |  Levadia Tallinn | 0-1 | RFS | |||
| q1l1 |  Víkingur | 2-3 | Lincoln Red Imps | |||
| q1l1 |  Egnatia | 1-0 | Breiðablik | |||
| q1l1 |  Drita | 1-0 | FC Differdange 03 | |||
| q1l1 |  Iberia 1999 | 1-3 | Malmö FF | |||
| q1l1 |  Noah | 1-0 | Budućnost | |||
| q1l1 |  Virtus | 0-2 | Zrinjski | |||
| Wednesday, 9 July 2025 | ||||||
| q1l1 |  FCSB | 3-1 | Inter Club d'Escaldes | |||
| q1l1 |  Shelbourne | 1-0 | Linfield | |||
| q1l1 |  Žalgiris | 2-0 | Hamrun Spartans | |||
| q1l1 |  Ludogorets | 1-0 | Dinamo Minsk | |||
| Tuesday, 15 July 2025 | ||||||
| q1l2 | Malmö FF | 3-1 | Iberia 1999 | 6-2 | ||
| q1l2 | RFS | 1-0 | Levadia Tallinn | 2-0 | ||
| q1l2 | Hamrun Spartans | 2-0 | Žalgiris | 2-2, aet, p11-10 | ||
| q1l2 | Breiðablik | 5-0 | Egnatia | 5-1 | ||
| q1l2 | Zrinjski | 2-1 | Virtus | 4-1 | ||
| q1l2 | Budućnost | 2-2 | Noah | 2-3 | ||
| q1l2 | Kairat | 2-0 | Olimpija | 3-1 | ||
| q1l2 | Shkëndija | 2-1 | The New Saints | 2-1, aet | ||
| q1l2 | FC Differdange 03 | 2-3 | Drita | 2-4 | ||
| q1l2 | Milsami | 0-0 | KuPS | 0-1 | ||
| q1l2 | Lincoln Red Imps | 1-0 | Víkingur | 4-2 | ||
| q1l2 | Inter Club d'Escaldes | 2-1 | FCSB | 3-4 | ||
| Wednesday, 16 July 2025 | ||||||
| q1l2 | Linfield | 1-1 | Shelbourne | 1-2 | ||
| q1l2 | Dinamo Minsk | 2-2 | Ludogorets | 2-3, aet | ||
