| ROUND | C | Q1 | Q2 | Q3 | R1 | R2 | QF | SF | F | |||||||||||
| l1 | l2 | l1 | l2 | l1 | l2 | r1 | r2 | r3 | r4 | r5 | r6 | l1 | l2 | l1 | l2 | l1 | l2 | |||
| Season archive |
| Tuesday, 18 July 2006 | ||||||
| q1l2 |  Sheriff | 2-0 | Pyunik | 2-0 | ||
| 30 | Cociș | |||||
| 90 | ||||||
| q1l2 |  Ekranas | 3-0 | Elbasani | 3-1 | ||
| 13 | Lukšys | |||||
| 48 | Tomkevicius | |||||
| 70 | Lukšys | |||||
| q1l2 |  Rabotnički | 0-0 | F91 Düdelingen | 1-0 | ||
| q1l2 |  Baki | 1-0 | Sioni | 1-2 | ||
| 63 | ||||||
| Wednesday, 19 July 2006 | ||||||
| q1l2 |  FH | 1-1 | TVMK | 4-3 | ||
| 90 | Guðnason | 60(p) | Dobrecovs | |||
| q1l2 |  Gorica | 2-2 | Linfield | 5-3 | ||
| 31 | Burgič | 28 | Thompson | |||
| 83 | Burgič | 90 | McAreavey | |||
| q1l2 |  B36 | 2-2 | Birkirkara | 5-2 | ||
| 44 | 59 | Mallia | ||||
| 80 | 83 | Scicluna | ||||
| q1l2 |  Apollon | 1-1 | Cork City | 1-2 | ||
| 51 | Sosin | 75 | Murray | |||
| q1l2 |  The New Saints | 0-1 | MyPa | 0-2 | ||
| 5 | Puhakainen | |||||
| q1l2 |  Široki Brijeg | 1-0 | Shakhter | 2-0 | ||
| 29(p) | ||||||
| q1l2 |  Aktobe | 1-1 | FK Liepāja | 1-2 | ||
| 17 | Nikolaev | 59 | Ivanovs | |||
